Thanks H2madness and OZBooster,
I broke out the Service Manual that came with the bike, schematics are great but try to find the fuze box locations except under the rear seat, which I already checked, they were all good.
I will have the shop check the main fuse under the ignition cowl, OZ where are the fuze blocks front and rear ?
I never turned the key on when I installed the battery wrong, the more I think about it, it sounded like the fuel pump, which is weird.
When I installed the battery correctly, turned the key on, no lights, etc... on the dash, and no fuel pump noise, which is normal when going to start the bike, because it primes briefly.
My mechanic said there may be some self protection built into the bike.
I am praying it didn't damage the ECU as I have had it reflashed, but I doubt it because the ignition switch was off.